Skip to main content

Table 1 Relative frequency, identity, and description of differentially expressed subtracted cDNA transcripts from C. abyssinica after 24 hrs exposure to arsenate

From: Expression profiling of Crambe abyssinicaunder arsenate stress identifies genes and gene networks involved in arsenic metabolism and detoxification

Transcripts relative frequency(%)

Description

AGI locus ID

E value

Max. Identity (%)

5

Peptide methionine sulfoxide reductase (PMSR)

At5g07470

9.00E-85

80

4

Aldo/keto reductase (AKR)

At1g10810

4.00E-51

75

1

Serine palmitoyl transferase (SPT)

At3g48780

0.00E+00

89

5

Oxophyto dienoate reductase (OPR)

At1g76680

5.00E-132

90

12

Glutathione-S-Transferase Tau subfamily (GST-Tau)

At2g29460

3.00E-149

86

4

Glutathione S Transferase Phi subfamily (GST-Phi)

At4g02520

0.00E+00

89

1

Monodehydro ascorbate reductase (MDAR)

At3g52880

0.00E+00

92

4

Adenosine phosphosulfate kinase (APSK)

At2g14750

0.00E+00

87

1

Sulfate adenylyltransferase (APS)

At4g14680

8.00E-176

89

1

Sulfite reductase (SiR)

At5g04590

6.00E-106

92

1

20S proteasome beta subunit (20SPBS)

At1g56450

2.00E-164

87

4

Uubiquitin 14 (UBQ 14)

At4g02890

9.00E-91

87

3

Ubiquitin-associated (UBA)/TS-N domain- containing protein (Ubq.assoc.)

At4g24690

8.00E-105

82

1

MATE - family drug transporter (MATE)

At1g33110

3.00E-82

85

1

ChaC like protein (ChaC)

At5g26220

7.00E-69

80

1

Unknown (UK17)

At3g19990

8.00E-118

91

1

Unknown (UK231)

At5g08060

1.00E-50

75

1

Unknown (UK325)

At5g14260

2.00E-94

78

1

Unknown (UK21)

At5g61820

1.00E-122

79

1

Unkown similar to luminal binding protein (UK lum)

At5g42020

0.00E+00

92

1

Fructose bi-phosphate aldolase (FBPA)

At2g36460

5.00E-113

87

3

Glyceraldehyde 3 phosphate dehydrogenase (GAPDH)

At3g04120

5.00E-171

94

1

Aspartate amino transferase (AAT)

At4g31990

1.00E-94

90

3

Defense related protein (DRP)

At4g30530

1.00E-146

86

1

Trypsin inhibitor (Tryp.Inb)

At1g73260

2.00E-119

78

1

Pathogenesis related protein (PRP)

At4g33720

5.00E-88

86

1

Tryptophan synthase (Trp.syn)

At3g54640

0.00E+00

89

1

Thioglucosidase precursor (Thiogluc.)

At3g09260

1.00E 89

87

12

Iron ion binding oxidoreductase (FeBOx)

At3g19000

1.00E-174

84

1

RNA-binding domain containing protein (RNA bind.)

At5g09880

2.00E-118

85

1

Cystein proteinase (Cys.pro)

At4g16190

4.00E-30

76

1

Aldose 1 Epimerase (A1E)

At4g25900

1.00E-160

83

15

Heat shock protein (HSP)

At4g27670

1.00E-149

81

1

Beta tubulin (β- tub.)

At5g44340

0.00E+00

91

1

Male sterility family protein (MS5)

At5g48850

0.00E+00

91

1

Anthranilate benzoyl transferase (ABT)

At5g48930

3.00E-157

83

1

Transport protein particle componentBet3plike (TRAPP)

At5g54750

0.00E+00

90

1

Extracellular dermal glycoprotein (EDGP)

At1g03220

1.00E-76

85