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Table 3 Additive QTLs for glycitein and total isoflavone accumulation in soybean seeds of Essex × PI 437654.

From: Intricate environment-modulated genetic networks control isoflavone accumulation in soybean seeds

Namea Interval ICb A ± SEc F-valued P-Value h2(a)e
Glycitein       
qGLY5 SATT236-SAT_271 26.4-35.4 7.1 ± 1.1 18.2 0.00000 1.4
qGLY6* SATT281-SATT291 40.0-52.7 -7.1 ± 0.9 9.2 0.00000 1.4
qGLY6_2 SATT319-EAACMCAC113 41.2-48.8 9.2 ± 0.9 8.3 0.00000 1.0
qGLY2 SAT_279-EACAMCTT123 0.0-5.0 5.9 ± 0.8 13.7 0.00000 0.9
qGLY15* SAT_112-SATT691 8.0-11.0 10.7 ± 1 19.9 0.00000 2.1
qGLY9 SATT242-EAACMCAC227 25.1-36.3 6.4 ± 0.9 10.0 0.00000 0.9
Total       
qTOT5* SATT174-SATT236 20.5-25.4 161.7 ± 8.3 36.7 0.00000 7.0
qTOT4 SAT_337-SAT_140 3.0-9.2 -104.1 ± 7.8 9.8 0.00000 1.1
qTOT2* SAT_279-EACAMCTT123 0.0-7.0 87.4 ± 8.1 34.7 0.00000 2.1
qTOT2_2 SAT_139-SAT_289 107.6-118.2 -63.2 ± 7.7 11.6 0.00000 1.9
qTOT15* SAT_112-SATT691 8.0-11.0 52.9 ± 8.5 15.0 0.00000 1.7
qTOT12* SCTT009-SATT541 0.0-4.0 95.2 ± 7.8 20.5 0.00000 3.4
qTOT16 SAT_339-SATT280 3.0-19.0 -125.8 ± 11.2 9.2 0.00000 1.3
qTOT19* SAT_286-SATT229 144.8-159.9 -69.9 ± 8.8 14.3 0.00000 1.4
qTOT7* SATT175-EAGGMCTT095 76.1-85.1 115.8 ± 9 11.0 0.00000 3.1
qTOT8* SATT187-EAGGMCTT205 23.0-29.1 -50.5 ± 14.6 19.3 (16.2) 0.000554 3.0
  1. aName given to a particular QTL, GLY and TOT for glycitein and total isoflavone content, respectively, followed by the chromosome number and a number when more than one in the same chromosome. Asterisks highlight QTL reported in our previous study [14]. bInterval of confidence in centiMorgans with respect to the first marker in the LG. cMain additive effect in μg/g plus/minus standard error. Mean effect of substituting both Essex alleles by PI437654 alleles. Thus, positive values indicate that the PI437654 allele increase the phenotypic value. dF-values of significance of each QTL. Threshold F-values were 7.2 and 8.0 for glycitein and total isoflavones, respectively, for the 4-environmentcombined analysis. Between brackets is the threshold F-value for QTLs identified at a particular environment. P-values represent the significance of each effect. eh2(a) is the heritability of the additive effect or percentage of variation (%) that is explained by the additive component of the QTL.