Table 3 Six known and five candidate genes around QEIs for salt tolerance index traits in soybean

LH

I

snp5442

2

394,740

4.04

0.32

9.16E-05

SUG

Glyma02g00640(GmPHO1)

AT3G23430

PHO1

phosphate 1

Wang et al. [57]

LH

IV

Gm09:3,553,566

9

3,553,566

7.54

0.43

2.86E-08

SIG

Glyma09g04630(GmERF5)

AT3G16770

EBP

ethylene-responsive element binding protein

Dong et al. [58]

LH

II

snp57179

12

1,726,812

8.13

0.79

7.37E-09

SIG

Glyma12g02540(GmNAC06)

AT2G17040

NAC036

NAC domain containing protein 36

Li et al. [24]

LH

IV

snp57993

12

7,068,862

5.67

0.32

2.14E-06

SUG

Glyma12g09190(GmHDA13)

AT3G44680

HDA9

histone deacetylase 9

Lu et al. [30]

LH

IV

snp67491

14

937,675

19.75

1.18

1.79E-20

SIG

Glyma14g01530(GmHsp90s)

AT5G56000

Hsp81.4

HEAT SHOCK PROTEIN 81.4

Xu et al. [60]

LR

V

snp57993

12

7,068,862

27.51

0.81

3.11E-28

SIG

Glyma12g09190(GmHDA13)

AT3G44680

HDA9

histone deacetylase 9

Lu et al. [30]

LR

V

snp66073

13

35,982,335

29.88

0.89

1.33E-30

SIG

Glyma13g34460(GmbZIP132)

AT3G14880

unknown

Liao et al. [59]

LH

IV

snp9763

2

44,325,265

4.51

0.25

3.12E-05

SUG

Glyma02g38910

AT5G58940

CRCK1

calmodulin-binding receptor-like cytoplasmic kinase 1

LH

V

snp57235

12

2,202,736

3.95

0.09

1.13E-04

SUG

Glyma12g03200

AT3G19830

NTMC2TYPE5.2

Calcium-dependent lipid-binding (CaLB domain) family protein

LH

IV

snp82823

16

31,773,546

16.76

0.99

1.74E-17

SIG

Glyma16g27950

AT2G33710

Integrase-type DNA-binding superfamily protein

LH

IV

snp93385

18

52,687,266

4.06

0.23

8.71E-05

SUG

Glyma18g43250

AT1G09950

RAS1

RESPONSE TO ABA AND SALT 1

LR

IV

snp80040

16

7,789,725

5.90

0.49

1.27E-06

SUG

Glyma16g08480

AT3G28345

ABC transporter family protein