Table 1 DEGs involved in the regulation of anthocyanin levels in purple- and green-stalked Chinese kale
Gene ID | Gene name | Average FPKM of green-stalked Chinese kale | Average FPKM of purple-stalked Chinese kale | Log2-fold change | FDR |
|---|---|---|---|---|---|
Bo5g137560 | PAL | 2.562997333 | 0.708516667 | −1.72 | 3.52E-09 |
Bo8g082620 | PAL | 3.009089667 | 0.916190667 | −1.63 | 3.38E-13 |
Bo4g030910 | PAL | 2.598262 | 26.19135667 | 3.31 | 1.24E-154 |
Bo3g024650 | C4H | 2.172948 | 0.592897 | −1.74 | 3.79E-08 |
Bo4g173080 | C4H | 3.310021333 | 6.834617333 | 1.04 | 4.83E-08 |
Bo5g102340 | 4CL | 4.910253667 | 0 | −5.63 | 1.17E-28 |
Bo5g103450 | 4CL | 0.890123333 | 3.861082667 | 2.04 | 2.05E-19 |
Bo6g099190 | 4CL | 0.990403333 | 4.934258667 | 2.24 | 2.79E-25 |
Bo9g166290 | CHS | 20.92536667 | 88.70838433 | 2.09 | 1.17E-121 |
Brassica_oleracea_newGene_7961 | CHS | 1.332888667 | 11.211386 | 2.97 | 4.90E-39 |
Bo3g009440 | CHS | 5.216807667 | 149.7133487 | 4.83 | 0 |
Bo9g177250 | CH1 | 1.513418 | 26.94277267 | 4.03 | 6.17E-96 |
Bo2g017790 | FLS | 15.01445933 | 4.946323667 | −1.57 | 1.75E-26 |
Bo02353s010 | FLS | 3.005581 | 0.497476333 | −2.26 | 1.62E-08 |
Bo8g081770 | F3H | 8.391290667 | 60.74696733 | 2.85 | 2.29E-191 |
Bo9g174880 | F3’H | 2.928916333 | 75.569687 | 4.64 | 0 |
Bo9g174900 | F3’H | 1.804787333 | 65.95989 | 5.05 | 2.55E-172 |
Bo9g058630 | DFR | 20.42142 | 221.340393 | 3.44 | 0 |
Bo7g108300 | ANS | 2.223137 | 71.22292833 | 4.95 | 0 |
Bo3g003410 | ANS | 0.815995 | 0.058852667 | −2.64 | 1.17E-06 |
Bo1g031790 | ANS | 24.01311467 | 222.6269683 | 3.21 | 0 |
Bo8g036810 | UFGT | 11.39123633 | 71.48828367 | 2.65 | 7.81E-204 |
Bo9g113880 | UFGT | 2.362485 | 17.00569033 | 2.82 | 2.35E-83 |