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Table 1 List of C. canephora accessions evaluated with DArTseq SNP markers

From: Identification by the DArTseq method of the genetic origin of the Coffea canephora cultivated in Vietnam and Mexico

Ā 

Wild/cultivated

Origin (prospection or cultivated)

No. of individuals

Provider

Putative genetic group

Reference

Markers

Active individuals

Wild

South - East Cameroon

9

IRD

Nana

[7]

RFLP

Wild

South - West Central African Republic

5

IRD

Nana

[7]

RFLP

Wild

South Central African Republic

9

IRD

Robusta Congo-Central Africa

[7]

RFLP

Wild/Cultivated

Ivory Coast

3

IRD

Guinean

[7]

RFLP

Cultivated

Ivory Coast

2

CIRAD

Conilon

[35]

Isozymes

Cultivated

Central America

2

Catie

Robusta Congo-Uganda

[10]

SSR

Cultivated

Uganda

4

Cori, Uganda

Robusta Congo-Uganda

[10]

SSR

Subtotal

Ā Ā 

34

Ā Ā Ā Ā 

Supplemental Individuals

Cultivated

Vietnam

6

AMSA

Unknown

Ā Ā 

Cultivated

Mexico, Chiapas

41

AMSA

Unknown

Ā Ā 

Subtotal

Ā Ā 

47

Ā Ā Ā Ā 

Biological replicates

Wild/Cultivated

Various

20

IRD/ CIRAD

Various

Ā Ā 

Additional technical replicates

Wild/Cultivated

Various

4

IRD/CIRAD

Various

Ā Ā 

Total

Ā Ā 

105

Ā Ā Ā Ā 
  1. Active individuals in multivariate analysis are those whose putative genetic group could be deduced from past studies. Other individuals, whose genetic group was unknown, were considered as supplementary individuals. Biological replicates are plants representing four different accessions