Table 1 Selected flowering time genes regulated in concert by both PHYB and PHYC
| Â | Â | Avg. normalized counts | Â | |||
|---|---|---|---|---|---|---|
Gene | Ensembl ID | PHYB | PHYC | Â | ||
| Â | Â | Wild-type | phyB-null | Wild-type | phyC-null | Putative function |
Downregulated in phyB-null and phyC-null mutants | ||||||
 PPD-B1 | Traes_2BS_8BED816B1.1 | 4,505 | 37 | 2,285 | 79 | Flowering induction |
 VRN-A1 | Traes_5AL_13E2DEC48.2 | 5,605 | 306 | 2,647 | 272 | Meristem identity |
 VRN-B1 | Traes_5BL_89636D032.1 | 1,573 | 73 | 884 | 89 | Meristem identity |
 FUL-A2 | Traes_2AL_20C2D79E1.2 | 820 | 2 | 279 | 3 | Meristem identity |
 GI-B | contig105156 | 739 | 233 | 642 | 169 | Circadian clock output |
 FT-A1 | Traes_7AS_EBD5F1F54.1 | 590 | 2 | 331 | 1 | Flowering induction |
 FT-B1 | Traes_7BS_581AA844D.1 | 797 | 1 | 267 | 2 | Flowering induction |
 GATA-B1 | contig67606 | 69 | 1 | 77 | 1 | Flowering induction |
 GATA-A7 | td-k51_contig_84804 | 194 | 2 | 225 | 2 | Flowering induction |
 CO-B9 | Traes_1BL_688EF6A1A.1 | 594 | 197 | 410 | 158 | Flowering induction |
Upregulated in phyB-null and phyC-null mutants | ||||||
 TaAGL33-A | Traes_5AL_6FF34F1C3.2 | 43 | 300 | 51 | 248 | Flowering induction |
 TaAGL33-B | Traes_4BL_5AF7ACF03.2 | 5 | 132 | 6 | 62 | Flowering induction |
 CO-A1 | Traes_7AS_F46AC277B.1 | 19 | 219 | 14 | 126 | Flowering induction |