Skip to main content

Table 2 Conditions for sugarcane TRAP genotyping used in the GWA study of sugarcane breeding population

From: Genome-wide association mapping of quantitative traits in a breeding population of sugarcane

TRAP

Primer forward

Primer reverse

aCy5.5-dCTP [μM]

 

Name

Sequence (3′-- > 5′)

Name

Sequence (3′-- > 5′)

 

T14

SuPS/ Sucrose phosphate synthase

CGACAACTGGATCAACAG

Arbi-2

GACTGCGTACGAATTGAC

0.8

T15

SuPS/ Sucrose phosphate synthase

CGACAACTGGATCAACAG

Arbi-3

GACTGCGTACGAATTTGA

0.5

T17

DirH/ Dirigent protein

TGGAGATTTTTGGAGGAAC

Arbi-2

GACTGCGTACGAATTGAC

0.5

  1. aFinal concetration of Cy5.5-dCTP in reaction