aSpot no. | bAccession no. | cProtein name, Orgnaism | dProtein score | eSC | fMP | gMW (kDa) /pI | hZC/JC | hZT/JT | hZT/ZC | hJT/JC |
---|---|---|---|---|---|---|---|---|---|---|
Photosynthesis | ||||||||||
 1 | gi|407970998 | Chlorophyll a-b binding protein 4, Solanum lycopersicum | 135 | 13 | 2 | 28.98/5.33 | 0.31* ± 0.15 | 0.45* ± 0.35 | 0.22* ± 0.13 | 0.18* ± 0.09 |
 2 | gi|115813 | Chlorophyll a-b binding protein 8, Solanum lycopersicum | 212 | 15 | 5 | 29.34/8.96 | 1.09 ± 0.22 | 0.45* ± 0.35 | 0.25* ± 0.06 | 0.90 ± 0.33 |
 3 | gi|460405507 | Chlorophyll a-b binding protein 8, Solanum lycopersicum | 81 | 4 | 1 | 29.26/8.65 | 1.34 ± 0.25 | 1.78 ± 0.30 | 0.46* ± 0.03 | 0.36* ± 0.13 |
 4 | gi|460375240 | Oxygen-evolving enhancer protein 1, Solanum lycopersicum | 273 | 10 | 2 | 35.15/5.91 | 0.84 ± 0.07 | 0.18* ± 0.01 | 0.31* ± 0.04 | 1.49 ± 0.38 |
 5 | gi|460372520 | Oxygen-evolving enhancer protein 1, Solanum lycopersicum | 99 | 19 | 2 | 35.48/5.84 | 1.93 ± 0.19 | 0.18* ± 0.01 | 2.21* ± 0.44 | 10.57* ± 0.52 |
 6 | gi|460408969 | Rubisco accumulation factor 1, Solanum lycopersicum | 119 | 9 | 3 | 50.46/5.10 | 5.36* ± 0.28 | 1.85 ± 0.28 | 0.77 ± 0,29 | 2.18* ± 0.39 |
 7 | gi|460401823 | Ribulose bisphosphate carboxylase/oxygenase activase 1, Solanum lycopersicum | 56 | 3 | 1 | 49.05/8.15 | 0.09* ± 0.04 | 0.57 ± 0.12 | 6.75* ± 0.18 | 1.07 ± 0.29 |
 8 | gi|723739979 | Ribulose bisphosphate carboxylase/oxygenase activase, Solanum lycopersicum | 285 | 11 | 3 | 50.97/8.76 | 0.88 ± 0.20 | 0.38* ± 0.30 | 0.07* ± 0.05 | 0.16* ± 0.01 |
 9 | gi|1778414 | Ribulose 1,5-bisphosphate carboxylase/oxygenase activase, Oryza sativa | 126 | 7 | 2 | 48.06/5.85 | 0.39* ± 0.04 | 0.78 ± 0.16 | 3.45* ± 0.40 | 1.73 ± 0.01 |
 10 | gi|100380 | Ribulose bisphosphate carboxylase activase, Nicotiana tabacum | 103 | 7 | 1 | 26.08/5.01 | 0.05* ± 0.01 | 0.03* ± 0.02 | 3.25* ± 0.44 | 5.57* ± 0.43 |
 11 | gi|488453358 | Ribulose 1,5-bisphosphate carboxylase, Solanum lycopersicum | 171 | 6 | 3 | 48.57/6.71 | 1.22 ± 0.14 | 43.48* ± 0.38 | 0.04* ± 0.01 | 0.01* ± 0,01 |
 12 | gi|488453358 | Ribulose 1,5-bisphosphate carboxylase, Solanum lycopersicum | 313 | 13 | 5 | 48.57/6.71 | 1.58 ± 0.11 | 23.71* ± 0.28 | 0.06* ± 0.01 | 0.02* ± 0.01 |
13 | gi|488453358 | Ribulose 1,5-bisphosphate carboxylase, Solanum lycopersicum | 62 | 4 | 2 | 48.57/6.71 | 1.37 ± 0.22 | 4.53* ± 0.25 | 0.05* ± 0.01 | 0.05* ± 0.01 |
 14 | gi|488453358 | Ribulose 1,5-bisphosphate carboxylase, Solanum lycopersicum | 124 | 8 | 3 | 48.57/6.71 | 0.83 ± 0.15 | 1.89 ± 0.20 | 0.09* ± 0.01 | 0.04* ± 0.01 |
 15 | gi|1293000 | Ribulose 1,5-bisphosphate carboxylase/oxygenase large subunit, Cheirodendron trigynum | 200 | 6 | 3 | 52.90/6.31 | 0.63 ± 0.04 | 1.18 ± 0.20 | 0.10* ± 0.05 | 0.06* ± 0.01 |
 16 | gi|168282 | Ribulose 1,5-bisphosphate carboxylase/oxygenase large subunit, Lactoris fernandeziana | 281 | 16 | 4 | 44.16/6.33 | 0.19* ± 0.02 | 0.28* ± 0.02 | 2.60* ± 0.39 | 1.76 ± 0.24 |
 17 | gi|21069067 | Ribulose 1,5-bisphosphate carboxylase/oxygenase large subunit, Asplenium jahandiezii | 60 | 4 | 1 | 39.38/7.31 | 1.00 ± 0.26 | 0.29* ± 0.10 | 0.02* ± 0.01 | 0.09* ± 0.08 |
 18 | gi|460379814 | RubisCO large subunit-binding protein subunit beta, Solanum lycopersicum | 203 | 10 | 4 | 64.53/5.46 | 5.11* ± 0.34 | 2.87* ± 0.15 | 1.26 ± 0.06 | 2.24* ± 0.19 |
 19 | gi|460366131 | RubisCO large subunit-binding protein subunit beta, Solanum lycopersicum | 53 | 4 | 2 | 63.24/5.72 | 1.15 ± 0.36 | 2.81* ± 0.25 | 0.69 ± 0.08 | 0.28* ± 0.09 |
 20 | gi|92087012 | Ribulose bisphosphate carboxylase large chain OS, Solanum lycopersicum | 65 | 6 | 3 | 53.43/6.55 | 0.77 ± 0.12 | 10.02* ± 0.24 | 0.09* ± 0.01 | 0.01* ± 0.01 |
 21 | gi|92087012 | Ribulose bisphosphate carboxylase large chain OS, Solanum lycopersicum | 121 | 14 | 6 | 53.43/6.55 | 1.18 ± 0.07 | 32.57* ± 0.19 | 0.08* ± 0.01 | 0.01* ± 0.01 |
 22 | gi|460375527 | Ferredoxin–NADP reductase, leaf-type isozyme, Solanum lycopersicum | 118 | 13 | 3 | 40.90/8.67 | 0.28* ± 0.07 | 0.93 ± 0.47 | 0.42* ± 0.10 | 0.14* ± 0.02 |
 23 | gi|460373374 | FerredoxinvNADP reductase, leaf-type isozyme, Solanum lycopersicum | 299 | 20 | 5 | 40.77/8.37 | 0.82 ± 0.07 | 0.61 ± 0.07 | 0.48* ± 0.02 | 0.65 ± 0.05 |
 24 | gi|350537679 | Carbonic anhydrase, Solanum lycopersicum | 278 | 17 | 4 | 34.85/6.67 | 1.45 ± 0.12 | 3.21* ± 0.27 | 0.85 ± 0.12 | 0.38* ± 0.05 |
 25 | gi|350537679 | Carbonic anhydrase, Solanum lycopersicum | 98 | 5 | 1 | 34.85/6.67 | 0.65 ± 0.15 | 0.35* ± 0.03 | 1.53 ± 0.18 | 2.81* ± 0.23 |
 26 | gi|460389468 | Protein TIC 62, Solanum lycopersicum | 313 | 13 | 5 | 52.96/7.66 | 1.02 ± 0.14 | 0.20* ± 0.11 | 0.13* ± 0.04 | 0.70 ± 0.17 |
 27 | gi|460372959 | Peptidyl-prolyl cis-trans isomerase CYP38, Solanum lycopersicum | 185 | 17 | 5 | 49.54/5.00 | 0.92 ± 0.12 | 1.61 ± 0.38 | 0.26* ± 0.05 | 0.15* ± 0.04 |
Carbohydrate metabolism and energy | ||||||||||
 28 | gi|469517896 | Glyceraldehyde-3-phosphate dehydrogenase, Atropa belladonna | 101 | 10 | 4 | 34.16/6.04 | 0.88 ± 0.11 | 0.98 ± 0.29 | 0.46* ± 0.03 | 0.44* ± 0.13 |
 29 | gi|460414390 | ATP synthase delta chain, Solanum lycopersicum | 166 | 6 | 4 | 27.32/8.90 | 0.49* ± 0.17 | 1.62 ± 0.23 | 0.38* ± 0.05 | 0.11* ± 0.03 |
 30 | gi|303279681 | Aryl-al/cohol dehydrogenase related protein, Micromonas pusilla | 54 | 3 | 1 | 41.07/8.65 | 0.53 ± 0.11 | 1.05 ± 0.21 | 2.49* ± 0.35 | 1.28 ± 0.19 |
 31 | gi|460397188 | Thiamine thiazole synthase, Solanum lycopersicum | 142 | 14 | 4 | 37.68/5.42 | 0.30* ± 0.21 | 3.06* ± 0.09 | 2.25* ± 0.07 | 0.23* ± 0.17 |
 32 | gi|460365268 | Biotin carboxylase 1, Solanum lycopersicum | 413 | 13 | 6 | 59.08/6.52 | 0.68 ± 0.27 | 1.51 ± 0.26 | 0.82 ± 0.08 | 0.37* ± 0.13 |
 33 | gi|723747143 | Aconitate hydratase, Solanum lycopersicum | 218 | 5 | 4 | 107.83/6.52 | 67.86* ± 0.19 | 3.13* ± 0.22 | 0.26* ± 0.02 | 5.77* ± 0.85 |
 34 | gi|350538543 | Succinic semialdehyde reductase isofom 2, Solanum lycopersicum | 123 | 7 | 2 | 38.94/8.50 | 2.01* ± 0.26 | 2.52* ± 0.10 | 1.24 ± 0.09 | 1.06 ± 0.93 |
 35 | gi|460408278 | Enolase-like, Solanum lycopersicum | 207 | 11 | 4 | 48.21/5.99 | 3.37* ± 0.29 | 4.38* ± 0.04 | 1.49 ± 0.09 | 1.14 ± 0.14 |
 36 | gi|460415839 | Probable ATP synthase 24 kDa subunit, Solanum lycopersicum | 78 | 5 | 1 | 27.75/8.69 | 0.44* ± 0.08 | 0.49* ± 0.12 | 1.31 ± 0.09 | 1.02 ± 0.28 |
 37 | gi|460373820 | ATP synthase gamma chain, Solanum lycopersicum | 167 | 12 | 3 | 41.75/8.15 | 1.93 ± 0.33 | 3.80* ± 0.24 | 0.09* ± 0.01 | 0.05* ± 0.01 |
 38 | gi|460365435 | Isocitrate dehydrogenase [NADP], Solanum lycopersicum | 172 | 12 | 4 | 47.00/6.35 | 1.05 ± 0.22 | 0.27* ± 0.12 | 0.21* ± 0.03 | 0.86 ± 0.14 |
 39 | gi|350535679 | Cytosolic NADP-malic enzyme, Solanum lycopersicum | 167 | 6 | 3 | 64.63/5.71 | 2.04* ± 0.20 | 1.20 ± 0.14 | 0.48* ± 0.07 | 0.49* ± 0.20 |
 40 | gi|31088232 | Chitinase, Solanum lycopersicum | 123 | 18 | 7 | 28.05/5.93 | 0.82 ± 0.11 | 0.30* ± 0.03 | 1.51 ± 0.31 | 4.12* ± 0.10 |
Proteometabolism | ||||||||||
 41 | gi|350535160 | Wound-inducible carboxypeptidase precursor, Solanum lycopersicum | 191 | 5 | 2 | 56.04/5.84 | 1.14 ± 0.07 | 0.78 ± 0.05 | 3.62* ± 0.30 | 5.27* ± 0.22 |
 42 | gi|350535160 | Wound-inducible carboxypeptidase precursor, Solanum lycopersicum | 177 | 5 | 3 | 56.04/5.84 | 1.07 ± 0.17 | 0.48* ± 0.02 | 2.72* ± 0.19 | 6.05* ± 0.30 |
 43 | gi|350534564 | 26S protease regulatory subunit 6A homolog, Solanum lycopersicum | 253 | 17 | 6 | 47.70/4.94 | 1.18 ± 0.05 | 0.78 ± 0.25 | 0.20* ± 0.07 | 0.30* ± 0.04 |
 44 | gi|460393754 | 26S protease regulatory subunit 6B homolog, Solanum lycopersicum | 198 | 7 | 2 | 46.80/5.63 | 1.24 ± 0.40 | 0.38* ± 0.13 | 0.33* ± 0.23 | 0.91 ± 0.34 |
 45 | gi|460400419 | Elongation factor G, Solanum lycopersicum | 258 | 11 | 5 | 86.79/5.45 | 3.75* ± 0.31 | 0.53 ± 0.02 | 0.47* ± 0.01 | 3.29* ± 0.39 |
 46 | gi|460415494 | Eukaryotic initiation factor 4A-2, Solanum lycopersicum | 370 | 18 | 7 | 47.10/5.46 | 1.82 ± 0.06 | 1.72 ± 0.15 | 0.35* ± 0.02 | 0.37* ± 0.02 |
 47 | gi|460399092 | Eukaryotic initiation factor 4A-2, Solanum lycopersicum | 304 | 13 | 4 | 47.14/5.54 | 1.22 ± 0.22 | 2.73* ± 0.07 | 0.49* ± 0.22 | 0.22* ± 0.05 |
 48 | gi|460391817 | Elongation factor TuB, Solanum lycopersicum | 125 | 5 | 2 | 56.29/6.69 | 0.62 ± 0.16 | 4.33* ± 0.23 | 2.45* ± 0.23 | 0.34* ± 0.03 |
 49 | gi|460399098 | Elongation factor 2 isoform X1, Solanum lycopersicum | 248 | 7 | 4 | 94.97/5.84 | 1.35 ± 0.24 | 3.39* ± 0.23 | 3.06* ± 0.11 | 1.22 ± 0.19 |
 50 | gi|460396224 | Eukaryotic translation initiation factor 3 subunit K, Solanum lycopersicum | 134 | 11 | 2 | 26.55/5.28 | 0.46* ± 0.03 | 1.12 ± 0.17 | 2.80* ± 0.26 | 1.15 ± 0.12 |
 51 | gi|460391351 | Cell division cycle protein 48 homolog, Solanum lycopersicum | 172 | 9 | 5 | 90.15/5.10 | 24.39* ± 0.39 | 1.57 ± 0.13 | 0.38* ± 0.04 | 5.90* ± 0.81 |
 52 | gi|460411520 | Cell division cycle protein 48 homolog, Solanum lycopersicum | 138 | 5 | 3 | 90.25/5.20 | 5.85* ± 0.22 | 0.91 ± 0.08 | 1.09 ± 0.04 | 7.00* ± 0.60 |
 53 | gi|2492530 | Leucine aminopeptidase 2, Solanum lycopersicum | 79 | 8 | 3 | 60.08/8.18 | 4.80* ± 0.15 | 2.68* ± 0.29 | 0.81 ± 0.07 | 1.46 ± 0.07 |
 54 | gi|350536267 | Subtilisin-like protease precursor, Solanum lycopersicum | 301 | 5 | 3 | 79.57/6.25 | 0.24* ± 0.02 | 0.07* ± 0.01 | 4.17* ± 0.29 | 14.46* ± 0.40 |
 55 | gi|460381101 | 28 kDa ribonucleoprotein, Solanum lycopersicum | 100 | 8 | 3 | 32.69/4.70 | 1.11 ± 0.19 | 1.15 ± 0.31 | 2.17* ± 0.70 | 2.05* ± 0.25 |
Amino acid metabolism | ||||||||||
 56 | gi|723717714 | Phosphoglycerate kinase, Solanum lycopersicum | 275 | 17 | 6 | 42.26/5.78 | 1.24 ± 0.46 | 0.47* ± 0.02 | 0.42* ± 0.02 | 1.11 ± 0.41 |
 57 | gi|460404838 | Adenosylhomocysteinase, Solanum lycopersicum | 119 | 12 | 4 | 53.59/5.57 | 1.10 ± 0.34 | 0.53 ± 0.16 | 0.21* ± 0.06 | 0.45* ± 0.19 |
 58 | gi|460395681 | Ketol-acid reductoisomerase, Solanum lycopersicum | 68 | 5 | 2 | 64.19/6.31 | 0.83 ± 0.40 | 0.34* ± 0.20 | 0.39* ± 0.09 | 0.97 ± 0.21 |
 59 | gi|460415192 | S-adenosylmethionine synthase 2, Solanum lycopersicum | 207 | 7 | 2 | 43.51/5.41 | 2.09* ± 0.26 | 2.04* ± 0.07 | 0.64 ± 0.06 | 0.86 ± 0.09 |
 60 | gi|460399143 | Glycine dehydrogenase (decarboxylating), Solanum lycopersicum | 192 | 9 | 6 | 114.02/6.69 | 1.90 ± 0.14 | 1.39 ± 0.08 | 4.02* ± 0.25 | 5.51* ± 0.19 |
 61 | gi|460399143 | Glycine dehydrogenase (decarboxylating), Solanum lycopersicum | 153 | 7 | 5 | 114.02/6.69 | 3.80* ± 0.19 | 5.08* ± 0.31 | 6.81* ± 0.38 | 5.09* ± 0.21 |
 62 | gi|460370413 | Glycine dehydrogenase, Solanum lycopersicum | 183 | 9 | 3 | 42.52/6.56 | 0.28* ± 0.02 | 12.57* ± 0.28 | 3.33* ± 0.16 | 0.07* ± 0.02 |
 63 | gi|170458 | Threonine deaminase, partial, Solanum lycopersicum | 194 | 9 | 4 | 65.05/5.26 | 1.01 ± 0.01 | 0.82 ± 0.04 | 5.90* ± 0.09 | 7.29* ± 0.29 |
 64 | gi|170458 | Threonine deaminase, partial, Solanum lycopersicum | 443 | 18 | 7 | 65.05/5.26 | 0.22* ± 0.01 | 0.40* ± 0.02 | 5.28* ± 0.62 | 2.96* ± 0.28 |
 65 | gi|170458 | Threonine deaminase, partial, Solanum lycopersicum | 175 | 7 | 3 | 65.05/5.26 | 0.97 ± 0.01 | 0.55 ± 0.02 | 4.35* ± 0.03 | 7.62* ± 0.14 |
 66 | gi|460398434 | Cysteine synthase, Solanum lycopersicum | 317 | 20 | 4 | 41.26/5.41 | 0.99 ± 0.02 | 6.39* ± 0.21 | 2.11* ± 0.22 | 0.33* ± 0.04 |
 67 | gi|460404180 | Cysteine synthase, Solanum lycopersicum | 274 | 17 | 5 | 34.34/5.93 | 1.89 ± 0.13 | 0.63 ± 0.38 | 0.33* ± 0.16 | 1.09 ± 0.19 |
Chaperones | ||||||||||
 68 | gi|460389504 | Protein disulfide-isomerase-like, Solanum lycopersicum | 82 | 6 | 2 | 55.11/4.81 | 0.53 ± 0.02 | 0.55 ± 0.01 | 3.51* ± 0.28 | 3.39* ± 0.22 |
 69 | gi|460395973 | Heat shock protein 83, Solanum lycopersicum | 76 | 1 | 1 | 90.77/5.23 | 0.96 ± 0.04 | 1.99 ± 0.03 | 19.73* ± 0.24 | 9.53* ± 0.23 |
 70 | gi|460395973 | Heat shock protein 83, Solanum lycopersicum | 193 | 3 | 3 | 90.77/5.23 | 1.24 ± 0.23 | 3.10* ± 0.37 | 2.07* ± 0.26 | 0.82 ± 0.07 |
 71 | gi|762844 | Hsc70, Solanum lycopersicum | 115 | 4 | 2 | 71.87/5.18 | 5.38* ± 0.40 | 0.60 ± 0.15 | 1.04 ± 0.28 | 9.20* ± 0.21 |
 72 | gi|170386 | Glucose-regulated protein 78, Solanum lycopersicum | 211 | 12 | 3 | 41.32/8.51 | 2.45* ± 0.40 | 0.73 ± 0.14 | 1.31 ± 0.26 | 4.32* ± 0.41 |
 73 | gi|145341034 | AAA-metalloprotease FtsH, Ostreococcus lucimarinus | 131 | 6 | 4 | 67.77/5.23 | 0.92 ± 0.05 | 0.63 ± 0.29 | 0.44* ± 0.01 | 0.75 ± 0.32 |
Signal transduction | ||||||||||
 74 | gi|1168191 | 14-3-3 protein 4 OS, Solanum lycopersicum | 58 | 25 | 4 | 29.40/4.69 | 0.78 ± 0.33 | 0.67 ± 0.29 | 0.10* ± 0.04 | 0.11* ± 0.05 |
 75 | gi|3041662 | 14-3-3 protein 3, Solanum lycopersicum | 165 | 12 | 2 | 29.40/4.74 | 0.56 ± 0.23 | 1.33 ± 0.24 | 0.21* ± 0.04 | 0.08* ± 0.02 |
 76 | gi|460405902 | Plasma membrane-associated cation-binding protein 1, Solanum lycopersicum | 95 | 6 | 1 | 21.98/5.03 | 1.71 ± 0.37 | 0.99 ± 0.19 | 0.20* ± 0.04 | 0.34* ± 0.04 |
 77 | gi|590715109 | Transducin family protein/WD-40 repeat family protein isoform 1, Theobroma cacao | 57 | 2 | 1 | 87.16/6.40 | 0.82 ± 0.01 | 0.18* ± 0.01 | 2.87* ± 0.03 | 12.76* ± 0.11 |
 78 | gi|460393840 | Proliferation-associated protein 2G4-like, Solanum lycopersicum | 134 | 7 | 2 | 43.07/6.41 | 2.16* ± 0.17 | 0.59 ± 0.15 | 0.27* ± 0.09 | 0.97 ± 0.19 |
 79 | gi|525314284 | Hop-interacting protein THI113, Solanum lycopersicum | 117 | 10 | 2 | 37.34/5.82 | 0.93 ± 0.14 | 0.11* ± 0.07 | 0.24* ± 0.18 | 1.96 ± 0.10 |
Detoxification and antioxidation | ||||||||||
 80 | gi|350536897 | Cytosolic ascorbate peroxidase 1, Solanum lycopersicum | 113 | 14 | 2 | 27.73/5.61 | 1.54 ± 0.26 | 0.66 ± 0.06 | 0.42* ± 0.09 | 0.96 ± 0.09 |
 81 | gi|350536897 | Cytosolic ascorbate peroxidase 1, Solanum lycopersicum | 115 | 7 | 1 | 27.73/5.61 | 7.20* ± 0.13 | 7.42* ± 0.32 | 6.03* ± 0.16 | 5.85* ± 0.07 |
 82 | gi|350539113 | Ascorbate peroxidase, Solanum lycopersicum | 141 | 5 | 2 | 42.38/8.65 | 1.90 ± 0.20 | 0.75 ± 0.18 | 0.32* ± 0.04 | 0.81 ± 0.07 |
 83 | gi|460373807 | Putative lactoylglutathione lyase, Solanum lycopersicum | 126 | 15 | 5 | 32.95/5.95 | 0.82 ± 0.22 | 0.17* ± 0.07 | 0.44* ± 0.21 | 2.05* ± 0.24 |
 84 | gi|50400860 | Monodehydroascorbate reductase, Solanum lycopersicum | 255 | 17 | 5 | 47.12/5.77 | 0.85 ± 0.07 | 0.49* ± 0.17 | 0.40* ± 0.18 | 0.69 ± 0.16 |
 85 | gi|251895 | Polyphenol oxidase, Solanum lycopersicum | 169 | 7 | 5 | 66.83/6.61 | 1.96 ± 0.06 | 2.87* ± 0.04 | 15.32* ± 0.10 | 10.49* ± 0.42 |
 86 | gi|460397526 | Heme-binding protein 2, Solanum lycopersicum | 183 | 17 | 3 | 26.12/7.59 | 0.84 ± 0.08 | 0.82 ± 0.05 | 4.29* ± 0.25 | 4.41* ± 0.18 |