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Table 3 Identification of LTR-retrotransposon elements and DNA sequences for interspersed repeats and low complexity DNA sequences within OsBgal6 and OsBgal13.

From: Genomic and expression analysis of glycosyl hydrolase family 35 genes from rice (Oryza sativa L.)

Genes

LTR-retrotransposon elements and DNA sequences for interspersed repeats

 

intron 1

intron 3

intron 8

intron 10

intron 13

intron 14

intron 16

OsBgal6

Stowaway41_OS, OLO24C, OLO24B, RPO_OS, AT rich Low Complexity, AMYLTP, TA rich Low Complexity, OSTE15

      

OsBgal13

GC rich Low complexity

AT rich Low complexity

MUDRN2

OSTE28, OSTE33, CRM-I_OS LTR/Gypsy,

OSLINE1-5, AT rich Low complexity

AT rich Low complexity

RdSpm875A_3.1, ID-2 DNA/Tourist

  1. RepeatMasker http://www.repeatmasker.org/cgi-bin/WEBRepeatMasker was used to identify these sequences.