Repeat motif | Number of repeats | Total | % | |||||||
---|---|---|---|---|---|---|---|---|---|---|
4 | 5 | 6 | 7 | 8 | 9 | 10 | >10 | |||
AC/GT | - | - | 31 | 9 | 7 | 6 | 1 | 2 | 56 | 3.50 |
AG/CT | - | - | 33 | 19 | 9 | 5 | 12 | 6 | 84 | 5.25 |
AT/AT | - | - | 32 | 13 | 3 | 48 | 3.00 | |||
CG/CG | - | - | 3 | 2 | 2 | 7 | 0.44 | |||
AAC/GTT | 42 | 2 | 44 | 2.75 | ||||||
AAG/CTT | 82 | 25 | 9 | 1 | 117 | 7.31 | ||||
AAT/ATT | 33 | 2 | 1 | 36 | 2.25 | |||||
ACC/GGT | 61 | 13 | 6 | 2 | 1 | 83 | 5.18 | |||
ACG/CGT | 71 | 9 | 2 | 1 | 83 | 5.18 | ||||
ACT/AGT | 21 | 5 | 2 | 28 | 1.75 | |||||
AGC/GCT | 104 | 26 | 9 | 1 | 1 | 141 | 8.81 | |||
AGG/CCT | 128 | 15 | 5 | 1 | 2 | 3 | 154 | 9.62 | ||
ATC/GAT | 70 | 32 | 3 | 4 | 1 | 1 | 111 | 6.93 | ||
CCG/CGG | 309 | 86 | 32 | 15 | 7 | 5 | 2 | 456 | 28.48 | |
AAAG/CTTT | 4 | 1 | 1 | 6 | 0.37 | |||||
AAGG/CCTT | 8 | 1 | 9 | 0.56 | ||||||
AATG/CATT | 12 | 12 | 0.75 | |||||||
ACGC/GCGT | 1 | 1 | 0.06 | |||||||
ACGG/CCGT | ||||||||||
ACGT/ACGT | 1 | 1 | 0.06 | |||||||
ACTC/GAGT | 15 | 15 | 0.94 | |||||||
AGAT/ATCT | 27 | 27 | 1.69 | |||||||
AGCC/GGCT | 5 | 5 | 0.31 | |||||||
AGCG/CGCT | 1 | 1 | 2 | 0.12 | ||||||
AGCT/AGCT | 5 | 5 | 0.31 | |||||||
AGGG/CCCT | 6 | 6 | 0.37 | |||||||
AGGT/ACCT | ||||||||||
CCCG/CGGG | 2 | 2 | 0.12 | |||||||
CCGG/CCGG | 2 | 2 | 0.12 | |||||||
CATC/GATG | 3 | 3 | 0.19 | |||||||
CTGC/GCAG | 1 | 1 | 0.06 | |||||||
GATC/GATC | 9 | 9 | 0.56 | |||||||
GCAT/ATGC | 1 | 1 | 0.06 | |||||||
AACC/GGTT | 1 | 1 | 2 | 0.12 | ||||||
AGTG/CACT | 1 | 1 | 0.06 | |||||||
ATAC/GTAT | 3 | 3 | 0.19 | |||||||
CCGA/TCGG | 5 | 5 | 0.31 | |||||||
GATG/CATC | 1 | 1 | 2 | 0.12 | ||||||
TATC/GATA | 1 | 1 | 0.06 | |||||||
TGTA/TACA | 2 | 3 | 5 | 0.31 | ||||||
AAGAG/CTCTT | 1 | 1 | 0.06 | |||||||
TCCCA/TCCCA | 1 | 1 | 0.06 | |||||||
TCGTC/GACGA | 3 | 3 | 0.19 | |||||||
AGAGG/CCTCT | 3 | 3 | 0.19 | |||||||
ATCGC/GCGAT | 1 | 1 | 0.06 | |||||||
CCGCT/AGCGG | 1 | 1 | 0.06 | |||||||
GCGAG/CTCGC | 1 | 1 | 0.06 | |||||||
TGTCG/CGACA | 3 | 3 | 0.19 | |||||||
CATGG/CCATG | 1 | 1 | 0.06 | |||||||
GATCT/AGATC | 1 | 1 | 0.06 | |||||||
GTGTT/AACAC | 1 | 1 | 0.06 | |||||||
TGTGG/CCACA | 1 | 1 | 0.06 | |||||||
AGAACA/TGTTCT | 1 | 1 | 0.06 | |||||||
ACCTCC/GGAGGT | 2 | 2 | 0.12 | |||||||
ACTCCT/AGGAGT | 1 | 1 | 0.06 | |||||||
AGAGGC/GCCTCT | 1 | 1 | 0.06 | |||||||
AGAGGG/CCCTCT | 1 | 1 | 0.06 | |||||||
AGAGGT/ACCTCT | 1 | 1 | 0.06 | |||||||
AGCTCC/GGAGCT | 1 | 1 | 0.06 | |||||||
GAAGAG/CTCTTC | 1 | 1 | 0.06 |