|  |  | In silico analyses | real-time RT-PCR | |||||
---|---|---|---|---|---|---|---|---|---|
Acc. nb | Contig/OC | Putative function | E | NE | P | Pred | p-value | ER 1 | ER 2 |
DT212490 | Cont0080 | vegetative storage protein, VSP [C. intybus] | 5 | 0 | ]0.08;0.07[ | E | Â | Â | Â |
DT212771 | Cont4942 | elongation factor EF-2 [P. sativum] | 10 | 0 | ]0.006;0.005[ | E | 0.09435 | -0.18 | 0.38 |
DT212374 | Cont9008 | Shaggy-like kinase tetha [A. thaliana] | 5 | 0 | ]0.08;0.07[ | E | Â | Â | Â |
DT212650 | OC0603_a | methionine synthase [S. tuberosum] | 6 | 0 | ]0.05;0.04[ | E | Â | Â | Â |
DT212300 | OC1814 | No hits found | 5 | 0 | ]0.08;0.07[ | E | <0.000001* | 2.00* | 1.90* |
DT212502 | OC1929 | G protein beta subunit [N. plumbaginifolia] | 5 | 0 | ]0.08;0.07[ | E | <0.000001* | 1.25* | 1.24* |
DT213897 | Cont0011 | catalase 3 [H. annuus] | 4 | 8 | ]0.09;0.08[ | NE | <0.000001* | -3.85* | -3.88* |
DT211305 | Cont0015 | L-asparaginase [G. max] | 0 | 3 | ]0.07;0.06[ | NE | 0.03694 | 0.18 | 0.40 |
DT211671 | Cont0026 | ss-1,3-glucanase [C. intybus × C. endivia] | 0 | 3 | ]0.07;0.06[ | NE | <0.000001* | -2.87* | -4.10* |
DT213305 | Cont0060 | 3-hydroxy-3-methylglutaryl coenzyme A reductase [S. tuberosum] | 8 | 15 | ]0.03;0.02[ | NE | <0.000001* | -2.30* | -2.03* |
DT212144 | Cont0082 | putative argininosuccinate synthase [A. thaliana] | 0 | 4 | ]0.03;0.02[ | NE | 0.00095* | 1.23* | 0.70* |
DT210848 | Cont0112 | heat shock protein 70 like protein [A. thaliana] | 0 | 3 | ]0.07;0.06[ | NE | Â | Â | Â |
DT211362 | Cont0201 | putative auxin-induced protein [A. thaliana] | 0 | 5 | ]0.02;0.01[ | NE | <0.000001* | -1.88* | -2.03* |
DT211152 | Cont0206 | fasciclin-like AGP 12 [P. alba × P. tremula] | 0 | 4 | ]0.03;0.02[ | NE | 0.00538 | -0.25 | -0.40 |
DT211657 | Cont1237 | pre-pro-cysteine proteinase [L. esculentum] | 0 | 4 | ]0.03;0.02[ | NE | <0.000001* | -2.32* | -3.00* |
DT211016 | Cont1242 | unknown protein [A. thaliana] | 0 | 3 | ]0.07;0.06[ | NE | Â | Â | Â |
DT210870 | Cont9022 | unknown yeast pheromone receptor-like protein AR781 [A. thaliana] | 0 | 3 | ]0.07;0.06[ | NE | Â | Â | Â |
DT213289 | Cont9039 | metallothionein 1 [A. tripolium] | 14 | 26 | ]0.004;0.003[ | NE | <0.000001* | -2.45* | -2.45* |
DT210772 | OC0003_b | glutathione S-transferase GST 13 [G. max] | 0 | 4 | ]0.03;0.02[ | NE | Â | Â | Â |
DT212623 | OC0023_a | glutathione transferase [H. muticus] | 3 | 11 | ]0.007;0.006[ | NE | <0.000001* | -2.78* | -2.85* |
DT211055 | OC0168 | 1-aminocyclopropane-1-carboxylate oxidase [L. esculentum] | 0 | 9 | <0.001 | NE | <0.000001* | -3.87* | -3.80* |
DT210897 | OC0178 | putative ribosomal S29 protein [A. thaliana] | 0 | 3 | ]0.07;0.06[ | NE | <0.000001* | 1.15* | 0.70* |
DT210805 | OC0344 | unknown protein [A. thaliana] | 0 | 3 | ]0.07;0.06[ | NE | <0.000001* | -1.35* | -1.68* |
DT211689 | OC0378_b | putative 60S ribosomal protein L5 [O. sativa] | 0 | 3 | ]0.07;0.06[ | NE | Â | Â | Â |
DT214125 | OC0533b | lipid transfer protein precursor [M. domestica] | 2 | 7 | ]0.04;0.03[ | NE | 0.06214 | -0.18 | -0.25 |
DT211562 | OC0559 | putative phosphatase type 2C [A. thaliana] | 0 | 3 | ]0.07;0.06[ | NE | 0.01554 | -0.25 | -0.25 |
DT211372 | OC0631 | No hits found | 0 | 3 | ]0.07;0.06[ | NE | 0.03982 | 0.20 | 0.20 |
DT211599 | OC0686 | unknown protein [A. thaliana] | 0 | 4 | ]0.03;0.02[ | NE | <0.000001* | -3.37* | -3.23* |
DT211633 | OC0696 | aquaporin [H. annuus] | 0 | 3 | ]0.07;0.06[ | NE | <0.000001* | -3.72* | -3.52* |
DT211922 | OC0724 | cellulose synthase family protein [A. thaliana] | 0 | 3 | ]0.07;0.06[ | NE | <0.000001* | -2.60* | -2.47* |
DT211365 | OC0727_b | G protein beta subunit-like [M. sativa] | 0 | 5 | ]0.02;0.01[ | NE | Â | Â | Â |
DT210839 | OC0758 | putative RNA-binding protein [A. thaliana] | 0 | 5 | ]0.02;0.01[ | NE | 0.01647 | 0.08 | 0.18 |
DT212897 | OC1229 | sucrose synthase isoform I [D. carota] | 1 | 5 | ]0.05;0.04[ | NE | 0.30612 | 0.08 | -0.32 |
DT212813 | OC0311_a | acidic ribosomal protein P0 [G. max] | 6 | 2 | Â | Â | <0.000001* | 1.62* | 1.68* |
DT212479 | OC0378_c | 60S ribosomal protein L5 [C. sativus] | 1 | 3 | Â | Â | <0.000001* | 0.58* | 0.85* |
DT211177 | OC0805_a | putative 60S ribosomal protein L35 [A. thaliana] | 0 | 1 | Â | Â | 0.00001* | 1.10* | 0.73* |
DT212655 | OC1088 | ribosomal protein L12 [C. intybus] | 1 | 1 | Â | Â | 0.00013* | 1.25* | 0.95* |
DT213187 | OC1549_a | 40S ribosomal protein S17 [L. esculentum] | 2 | 1 | Â | Â | <0.000001* | 1.72* | 1.55* |
DT212250 | OC2155_a | P40-like ribosomal protein [D. carota] | 3 | 0 | Â | Â | 0.00003* | 0.58* | 0.82* |
DT212554 | Cont0001 | glyceraldehyde-3-phosphate dehydrogenase [S. alba] | 9 | 2 | Â | Â | <0.000001* | 1.20* | 0.97* |
DT210799 | Cont0006 | 1-aminocyclopropane-1-carboxylate oxidase [P. hortorum] | 2 | 5 | Â | Â | <0.000001* | -3.82* | -4.28* |
DT211255 | Cont0024 | seed specific protein Bn15D17A [B. napus] | 3 | 5 | Â | Â | 0.25124 | 0.00 | 0.13 |
DT211067 | Cont6402 | putative leaf development protein Argonaute [A. thaliana] | 1 | 1 | Â | Â | <0.000001* | 1.37* | 1.37* |
DT210888 | OC0071 | 14-3-3 protein [S. tuberosum] | 0 | 1 | Â | Â | <0.000001* | -1.78* | -2.05* |
DT210862 | OC0172 | embryogenic callus protein 181 [D. carota] | 0 | 2 | Â | Â | 0.56355 | -0.28 | 0.05 |
DT211413 | OC0565_a | acetoacetyl-CoA thiolase [A. thaliana] | 0 | 2 | Â | Â | <0.000001* | -2.52* | -2.42* |
DT212452 | OC0603_b | cobalamine-independent methionine synthase [S. scutellarioides] | 7 | 1 | Â | Â | <0.000001* | -1.90* | -1.57* |
DT212234 | OC0687 | arabinogalactan protein [D. carota] | 7 | 1 | Â | Â | <0.000001* | 6.73* | 6.82* |
DT212237 | OC0834 | chromatin remodeling factor CHD3 [A. thaliana] | 1 | 0 | Â | Â | 0.00042 | 0.50 | 0.50 |
DT212556 | OC1068 | leaf senescence protein-related (YLS7) [A. thaliana] | 2 | 0 | Â | Â | <0.000001* | -1.55* | -1.38* |
DT212596 | OC1155 | xyloglucan endotransglycosylase [M. domestica] | 2 | 0 | Â | Â | 0.00011 | -0.57 | -0.52 |
DT212803 | OC1211 | BTB/POZ domain-containing protein [A. thaliana] | 2 | 0 | Â | Â | 0.00365 | 0.38 | 0.42 |
DT213079 | OC1347 | putative ethylene response element binding protein [N. tabacum] | 1 | 2 | Â | Â | 0.00007* | -1.45* | -1.22* |
DT212789 | OC1427_b | Cell division control protein 48 homolog E [A. thaliana] | 2 | 0 | Â | Â | 0.00001* | 0.60* | 0.60* |
DT213276 | OC1785_a | H(+)-transporting ATPase [P. vulgaris] | 2 | 0 | Â | Â | 0.00002* | -0.87* | -0.93* |
DT212233 | OC1796 | ring domain containing protein [C. annuum] | 10 | 8 | Â | Â | <0.000001* | -2.18* | -2.35* |
DT212829 | OC1960 | tuber-specific/sucrose-responsive element binding factor [S. tuberosum] | 4 | 0 | Â | Â | 0.00021 | -0.15 | -0.65 |