Table 2 Novel miRNAs identified from the six small RNA libraries
Name | Count | miRNA Sequence | Fold energy |
|---|---|---|---|
Mar-F-1-m0001 | 42 | CGCUAUCCAUCCUGAGUUUCA | −50.60 |
Mar-F-1-m0002 | 8 | UCUUGUACUGCAUCAUAACUU | −55.90 |
Mar-F-1-m0004 | 58 | AGAGAUUGCAUUUCCUCUUCCA | −29.40 |
Mar-F-1-m0006 | 12 | UAACUGAAGAGUUUGAUCAUGG | −90.50 |
Mar-F-1-m0011 | 24 | UGCAAAUCCAGUCAAAAGUUA | −33.90 |
Mar-F-1-m0013 | 21 | GGGAAUUUCUGAUUGUCGGGG | −46.30 |
Mar-F-1-m0017 | 34 | UGCUCACUUCUCUUCUGUCAGC | −57.60 |
Mar-F-1-m0018 | 78 | UUCCAUCUCUUGCACACUGGA | −44.60 |
Mar-F-1-m0019 | 13 | CCAAGAGGAUUGAAGGCCAUG | −39.30 |
Mar-F-1-m0022 | 11 | GAAGCGCCUGGCAAGUUAGAC | −42.80 |
Mar-F-1-m0024 | 72 | CGAGCCGAAUCAAUAUCACUC | −40.10 |
Mar-F-1-m0025 | 30 | AGCUGCUUGGCUAUGGAUCCC | −46.10 |
Mar-F-1-m0026 | 9 | AUGACCAUUCAAGAAAGUGCU | −59.25 |
Mar-F-1-m0027 | 82 | GUAGUUGAACGACGUUUAUCUA | −35.40 |
Mar-F-1-m0029 | 121 | GGAGCAUCAUCAAGAUUCACA | −48.11 |
Mar-F-1-m0030 | 1765 | UUACUUUAGAUGUCUCCUUCA | −48.92 |
Mar-F-1-m0031 | 52 | UCCAAAGGGAUCGCAUUGAUC | −58.70 |
Mar-F-1-m0032 | 14 | ACGUUAUGGGCAUGGUAUGGA | −50.92 |
Mar-F-1-m0033 | 12 | CAUGACUUUUAGCGGCGUUUG | −32.80 |
Mar-F-1-m0035 | 6 | UGGUUUUCAAGUGGGAUUUGCUG | −60.90 |
Mar-F-1-m0038 | 136 | UUCAGAAACCAUCCCUUCCUU | −58.60 |
Mar-F-1-m0039 | 3138 | ACAGCUUUAGAAAUCAUCCCU | −52.50 |
Mar-F-1-m0040 | 12 | GCUCUCUAUGCUUCUGUCAUC | −55.00 |
Mar-F-1-m0041 | 9 | AUAUGUUAGAUCAAAGAGUAA | −49.50 |
Mar-F-1-m0042 | 162 | GGCUGUGGUUGAUUCGGCAAGA | −37.55 |
Mar-F-1-m0043 | 73 | AAUGGAGGAGUUGGAAAGAUU | −37.39 |
Mar-F-1-m0044 | 14 | AGUGGAUUGGGCUACAGUUUCUU | −27.10 |
Mar-F-1-m0048 | 6 | AUAAAAUACUGAUGUGACAUA | −33.90 |
Mar-F-1-m0051 | 9 | ACGGUUUUAAGUUUUAACUGA | −28.42 |
Mar-F-1-m0052 | 9 | GACGGUUUUAAGUUUUAACUG | −28.42 |
Mar-F-1-m0053 | 12 | UUGGCGAACAAAUCAGUAGGAGU | −20.80 |
Mar-F-1-m0054 | 8 | ACGACAGAAAAAAGGAUUGAUCA | −30.30 |
Mar-F-1-m0055 | 21 | AAGUGGGAUGGGUGGAAAGAUU | −40.90 |
Mar-F-2-m0006 | 12 | GGAGGAUCUCCAGGACUUGGCUU | −36.69 |
Mar-F-2-m0014 | 219 | GAUUUGGGGCAAAGACGGGAU | −42.80 |
Mar-F-2-m0016 | 7 | CUGGAUGCAGAGGUUUAUCGA | −51.70 |
Mar-F-2-m0019 | 11 | GUGAUUGGGCUAGGGUCUAGGCA | −28.84 |
Mar-F-2-m0020 | 9 | AAAACUGGACUGUUGUAUUGGUU | −39.70 |
Mar-F-2-m0022 | 8 | UUAGAUUCAUUGGCUGAGUUA | −95.50 |
Mar-F-2-m0034 | 65 | AACCAAUGACUAUUCAUGAUUCC | −25.30 |
Mar-F-2-m0035 | 7 | GGGAGAAAUUAGAUUGCCGA | −18.33 |
Mar-F-2-m0039 | 10 | AAGCUUGCUAGGCUCAAAGCCCA | −20.00 |
Mar-F-2-m0043 | 11 | GUUCGAUUCUCGGAAUGCCC | −56.80 |
Mar-F-2-m0046 | 14 | GGAAGGGAUAUAACUCAGCGGUA | −28.60 |
Mar-F-2-m0051 | 12 | AAAGGGAUGAUUUCUAAAGCU | −47.85 |
Mar-F-2-m0055 | 10 | UAUGUUAGAUCAAAGAGUAAAUU | −48.90 |
Mar-F-2-m0058 | 18 | UGCCUGGCUCCCUGUAUGCCU | −42.10 |
Mar-F-2-m0064 | 8 | AUACGACUAGCGCGACUCGA | −83.97 |
Mar-F-2-m0065 | 10 | AAGAGUCAGAUUGCAUUUUGC | −25.40 |
Mar-F-2-m0067 | 11 | AGGUACAGAGUCUGUUGGCAU | −47.80 |
Mar-F-2-m0069 | 294 | GAUGGGUGAGGGGGUAAGACA | −52.80 |
Mar-F-2-m0071 | 8 | AAGAGAGAAAGAGAGGCCUGGA | −30.62 |
Mar-F-3-m0001 | 16 | ACUAAAAAAUGGGCAAAUUAG | −70.85 |
Mar-F-3-m0002 | 12 | CUUUGGAGGGGAGAUUAGAGC | −61.05 |
Mar-F-3-m0006 | 8 | AGGGAAGGUUAGAUAUUUAUA | −77.80 |
Mar-F-3-m0008 | 46 | UAGAGAUUGCAUUUCCUCUUCC | −29.40 |
Mar-F-3-m0014 | 10 | CGUGGUGAUCAGUUGGACCUUU | −23.40 |
Mar-F-3-m0018 | 6 | GGCAGCGGUUCAUCGAUCUCU | −28.70 |
Mar-F-3-m0029 | 5 | UUUAAUUUCCUCCAAUAUCUUA | −46.64 |
Mar-F-3-m0031 | 23 | UGCCUGGCUCCCUGAAUGCCA | −53.30 |
Mar-F-3-m0032 | 103 | UAGCCAAGGAUGACUUGCCUG | −54.30 |
Mar-F-3-m0035 | 18 | UGAUAUUGGCCUGGUUCACUC | −44.99 |
Mar-F-3-m0036 | 10 | CUCUAUGGUAGAAUCAGUCGGGG | −42.60 |
Mar-F-3-m0038 | 458 | UUCCACAGCUUUCUUGAACUU | −62.70 |
Mar-F-3-m0041 | 909 | GGAAUGUUGUCUGGCUCGAGG | −50.90 |
Mar-F-3-m0043 | 35 | AGAUCAUGUGGCAGUUUCACC | −45.64 |
Mar-F-3-m0044 | 7 | AGAGCUUUCUUCAGUCCACUC | −82.60 |
Mar-F-3-m0048 | 111 | UUGGUGCGGUUCAAUCAGAUA | −50.80 |
Mar-F-3-m0049 | 20 | CGAAUGAUCUCGGACCAGGCU | −35.76 |
Mar-F-3-m0050 | 154 | AUCAUGUGGCAGUUUCACCUG | −44.00 |
Mar-F-3-m0056 | 4369 | UCUUGACCUUGUAAGACCUUU | −48.30 |
Mar-F-3-m0058 | 10 | GGAAUGUUGGCUGGCUCGAAG | −52.60 |
Mar-F-3-m0064 | 38 | UGAAUGAUUUCGGACCAGGCU | −40.80 |
Mar-F-3-m0065 | 28 | UGGUGCAGGUCGGGAACUGAU | −76.37 |
Mar-F-3-m0067 | 65 | UUCCACGGCUUUCUUGAACUU | −51.20 |
Mar-F-3-m0070 | 22 | UGCAUUCUGAUGUAUGGGGAC | −69.07 |
Mar-F-3-m0080 | 14 | UUUAAUAUUGUUUGGAUAUUGU | −32.70 |
Mar-F-3-m0087 | 5 | CGGCAAGUUGUCUUUGGCUAC | −52.00 |
Mar-F-3-m0091 | 12 | CAGGUGUAGCAUCAUCAAGAU | −63.81 |
Mar-F-3-m0092 | 30 | UCAGGUCAUCUUGCAGCUUCA | −111.30 |
Mar-F-3-m0093 | 53 | CGCUAUCUAUCCUGAGUUUCA | −61.50 |
Mar-F-3-m0095 | 26 | UUGAAGACCCAUUUGCAACCAA | −24.80 |
Mar-F-3-m0110 | 15 | CUCUUGUUGGGCAAAUGAGCAU | −22.10 |
Mar-F-3-m0113 | 6 | UGGGAACUUGAAGAUGAGGCU | −29.40 |
Mar-F-3-m0115 | 15 | AGGAGGAGCAGGAAGCAGUAACU | −56.90 |
Mar-F-3-m0120 | 6 | UUUCAACAUAGUAGAGGGACU | −102.07 |
Mar-F-3-m0124 | 11 | UAUAUGGCUUAAAACAGGCUCC | −78.30 |
Mar-F-3-m0127 | 21 | UCUUUCCUACUCCUCCCAUUCC | −55.10 |
Mar-F-3-m0141 | 10 | AUGGACAUCCAAGGGGGAGUGUU | −50.46 |
Mar-F-3-m0146 | 15 | UCCCUUUGGAUGUCUUCUUGC | −75.70 |
Mar-F-3-m0164 | 22 | UGGCUUCUAGACAGUGGAUGCA | −23.40 |
Mar-F-3-m0178 | 24 | UGUUGGCUCGGUUCACUCAGA | −61.50 |
Mar-F-3-m0183 | 21 | AUGCACUGCCUCUUCCCUGGC | −50.60 |
Mar-F-3-m0185 | 160 | UGGAGGCAGCGGUUCAUCGAUC | −36.30 |
Mar-F-3-m0198 | 7 | AAGAGUCAGAUUGCAUUUUG | −25.40 |
Mar-F-3-m0200 | 9 | AGAGGUGAUCAUGGGCCGGG | −21.20 |
Mar-F-3-m0205 | 32 | CAGCCCUGGUGUUGGACAUUC | −46.00 |
Mar-S-1-m0013 | 9 | GGGGCUGCAUUGAAGUGAAGGCU | −76.70 |
Mar-S-1-m0014 | 7 | UUCCACAGCUUUCUUGAACUG | −49.30 |
Mar-S-1-m0035 | 12 | ACAGGACAGGACAGGACAGGACA | −68.99 |
Mar-S-1-m0039 | 13 | UGGCGUAUGAGGAGCCAUGCA | −51.90 |
Mar-S-1-m0097 | 18 | AUAUGGCUUAAAACAGGCUCCA | −78.30 |
Mar-S-1-m0110 | 8 | AGAGGAGAAGAAAAUUCACUAUA | −45.65 |
Mar-S-2-m0027 | 7 | AUUGGUGAUUGACAUUUUUAUCU | −33.10 |
Mar-S-2-m0040 | 67 | GGAAUGGAGGAGUUGGAAAGA | −47.59 |
Mar-S-2-m0043 | 6 | UCUUUGAUCUAAUAUACAGG | −40.30 |
Mar-S-2-m0046 | 7 | AGUGUAAGACCUGUCUGGGACA | −28.50 |
Mar-S-2-m0051 | 6 | CUGAGGUUGGGUCGGACGACA | −30.02 |
Mar-S-3-m0014 | 6 | UCCAUGGUGGAGAUUGCUCUU | −30.00 |
Mar-S-3-m0041 | 16 | UGUUGAAGGUCGAUGGGUUAA | −39.70 |