Figure 1

Prototype plant analysis pipeline. The horizontal axis (1) illustrates our prototype cross-sectional (observation of a representative subset of a population at a specific time-point) pipeline which is divided into 4 main stages: plant image acquisition, surface mesh reconstruction, morphological mesh segmentation (see Figure 2), and plant phenotypic parameters extraction. Monitoring the phenotypic parameters over-time (2) involves repeating the cross-sectional pipeline throughout all the time-points available and analysing the variations in the plant phenotype (the temporal pipeline is detailed on Figure 3).