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Table 5 Details on marker groups (MGs) for multiplex assays for assessing purity of two hybrids

From: Analysis of BAC-end sequences (BESs) and development of BES-SSR markers for genetic mapping and hybrid purity assessment in pigeonpea (Cajanus spp.)

Hybrid/Marker

group ID

Number of

markers

Marker names

ICPH 2671a

  

MG 1

7

CcM0724:CcM2626:CcM2300:CcM1837:CcM1565:CcM3024:CcM1246

MG 2

7

CcM2350:CcM0737:CcM2517:CcM1825:CcM2228:CcM0516:CcM0171

MG 3

6

CcM2802:CcM2704:CcM2097:CcM0021:CcM1459:CcM0752

MG 4

6

CcM1895:CcM2076:CcM2948:CcM1707:CcM2257:CcM2281

MG 5

5

CcM1232:CcM1053:CcM1139:CcM2401:CcM0207

MG 6

4

CcM2370:CcM0374:CcM0257:CcM0246

MG 7

2

CcM1984:CcM0252

MG 8

2

CcM1385:CcM2453

MG 9

2

CcM1559:CcM0948

ICPH 2438

  

MG 1

8

CcM1825:CcM0878:CcM2672:CcM0057:CcM1713:CcM1651:CcM1647:CcM2330

MG 2

6

CcM1338:CcM1669:CcM2492:CcM2413:CcM0858:CcM1251

MG 3

5

CcM0121:CcM0008:CcM0257:CcM2380:CcM1371

MG 4

5

CcM1559:CcM2241:CcM1895:CcM0402:CcM1406

MG 5

4

CcM2386:CcM2449:CcM1565:CcM0207

MG 6

2

CcM0522:CcM1438

MG 7

2

CcM2164:CcM2781

MG 8

2

CcM0133:CcM0195

MG 9

2

CcM0481:CcM2595

MG10

2

CcM0948:CcM1282

MG11

2

CcM1616:CcM0252

MG12

2

CcM2982:CcM1078

  1. aOut of 42 informative markers identified for ICPH 2671, only 41 primers could be grouped in different multiplexes and the marker CcM1277 could not be multiplexed in any marker group.
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BMC Plant Biology

ISSN: 1471-2229

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