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Table 2 The number of up- and down-regulated genes in roots of rice genotypes under different drought stress treatments

From: Comparative analysis of root transcriptome profiles of two pairs of drought-tolerant and susceptible rice near-isogenic lines under different drought stress

  

Genotypes

 

drought stress

DEG

 

IR77298-14-1-2-B

IR77298-5-6-B

common

(FTSW)

 

IR64

10

13

18

11

 
 

Up

9686

10,232

9559

9262

8956

5760

0.2

Down

7218

7586

7532

7340

7400

4815

 

total

16,904

17,818

17,091

16,602

16,356

10,755

 

Up

7780

8675

7975

8575

8488

3846

0.5

Down

6662

7539

7067

7348

7533

3794

 

total

14,442

16,214

15,042

15,923

16,021

7640

  1. DEG: differentially expressed genes; Up: up-regulated; and Down: down-regulated
  2. 10: IR77298-14-1-2-B tolerant NIL i.e. IR77298-14-1-2-B-10; 13: IR77298-14-1-2-B susceptible NIL i.e. IR77298-14-1-2-B-13,
  3. 18: IR77298-5-6-B tolerant NIL i.e. IR77298-5-6-B-18; 11: IR77298-5-6-B susceptible NIL i.e. IR77298-5-6-B-11.
  4. 0.2 and 0.5 FTSW are severe and mild drought stress treatments
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BMC Plant Biology

ISSN: 1471-2229

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