Table 4 Number of collected individual QTLs, meta-QTLs, and colocalizations with Rpi-genes, RGAs and DRLs, per chromosome
Chrom. | No. maturity QTLs included in meta-analysis/No. QTLs | No. maturity meta-QTLs | No. late blight resistance QTLs included in meta-analysis/No. QTLs | No. late blight meta-QTLs | Rpi-genes positioned on the consensus map | No. Rpi-genes colocalizing with late blight meta-QTLs/No. Rpi-genes | No. RGAs colocalizing with late blight meta-QTLs/No. RGAs | No. DRLs colocalizing with late blight meta-QTLs/No. DRLs |
|---|---|---|---|---|---|---|---|---|
I | 3/3 | 0 | 10/10 | 2 | - | 0/0 | 0/10 | 4/8 |
II | 1/1 | 0 | 6/7 | 3 | - | 0/0 | 5/7 | 5/8 |
III | 3/4 | 0 | 15/21 | 3 | - | 0/0 | 0/2 | 0/5 |
IV | 4/4 | 1 | 15/36** | 2 | R2, R2-like, Rpi-blb3, Rpi-abpt, Rpi-demf1, Rpi-mcd, Rpi-mcd1 | 7/7 | 2/7 | 1/5 |
V | 8/29* | 1 | 21/44*** | 2 | R1 | 0/1 | 0/14 | 0/3 |
VI | 5/5 | 2 | 8/12 | 2 | Rpi-blb2 | 1/1 | 1/5 | 6/9 |
VII | 3/3 | 1 | 9/12 | 1 | Rpi1=Rpi-pnt1 | 0/1 | 0/4 | 0/2 |
VIII | 6/6 | 1 | 12/13 | 2 | RB, Rpi-blb1, Rpi-pta1, Rpi-plt1, Rpi-sto1 | 0/5 | 0/2 | 3/11 |
IX | 1/1 | 0 | 9/13 | 1 | Rpi-vnt1.1, Rpi-vnt1.2, Rpi-vnt1.3, Rpi-phu1, Rpi-moc1= Rpi-mcq1 | 0/5 | 0/2 | 1/9 |
X | 1/1 | 0 | 15/18 | 2 | Rber=Rpi-ber1, Rpi-ber2 | 1/2 | 1/8 | 3/6 |
XI | 6/6 | 2 | 14/15 | 2 | R3a, R3b, R5, R6, R7, R8, R9, R10, R11, Rpi-pcs, Rpi-stirling | 1/11 | 5/18 | 3/3 |
XII | 1/1 | 0 | 10/10 | 2 | - | 0/0 | 0/1 | 0/3 |
Total | 42/64 | 8 | 144/211 | 24 | - | 10/33 | 14/80 | 26/72 |