Table 1 List of the 21 proteins identified by LC-ESI-MS/MS whose concentration is increased under Fe deficiency in cucumber roots.
From: Proteomic characterization of iron deficiency responses in Cucumis sativusL. roots
Spot ID | Accession number | Species | Protein description | EC | Abbreviation | Mra/pI a | Mrb/pI b | Cov. (%) c |
|---|---|---|---|---|---|---|---|---|
Glycolysis | ||||||||
813 | Q42908 | Mesembryanthemum crystallinum | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | 5.4.2.1 | PGAM1-a | 60.0/5.6 | 61.2/5.4 | 18 |
832 | O24246 | Prunus dulcis | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | 5.4.2.1 | PGAM1-b | 60.0/5.6 | 53.4/5.4d | 20d |
869 | P35493 | Ricinus communis | 2,3-bisphosphoglycerate-independent phosphoglycerate mutase | 5.4.2.1 | PGAM1-c | 60.0/5.6 | 60.8/5.5 | 10 |
954 | Q41141 | Ricinus communis | pyrophosphate--fructose 6-phosphate 1-phosphotransferase subunit beta | 2.7.1.90 | PPi-PFK | 54.4/5.8 | 60.1/6.2 | 5 |
1080 | P42896 | Ricinus communis | Enolase | 4.2.1.11 | ENO-a | 44.9/5.3 | 47.9/5.6 | 42 |
1116 | AAS66001 | Capsella bursa-pastoris | LOS2 | 4.2.1.11 | ENO-b | 46.4/5.1 | 47.7/5.4 | 32 |
1514 | Q42962 | Nicotiana tabacum | phosphoglycerate kinase, cytosolic | 2.7.2.3 | PGK | 36.7/5.4 | 42.4/5.7 | 44 |
1612 | CAB77243 | Persea americana | fructose-bisphosphate aldolase | 4.1.2.13 | FBA-a | 35.4/6.4 | 38.6/6.5 | 20 |
1662 | CAB77243 | Persea americana | fructose-bisphosphate aldolase | 4.1.2.13 | FBA-b | 34.6/5.9 | 38.6/6.5 | 20 |
Carbohydrate-related metabolism | ||||||||
1519 | ABC02081 | Cucumis melo | putative alcohol dehydrogenases | 1.1.1.1 | ADH-a | 36.9/6.0 | 41.0/6.8 | 26 |
1593 | ABC02081 | Cucumis melo | putative alcohol dehydrogenases | 1.1.1.1 | ADH-b | 35.7/6.1 | 41.0/6.8 | 20 |
1739 | Q08062 | Zea mays | malate dehydrogenase, cytoplasmic | 1.1.1.37 | MDH | 33.7/5.3 | 35.6/5.8 | 7 |
2613 | ACJ04703 | Cucumis melo | galactokinase | 2.7.1.6 | GALK | 49.2/5.6 | 54.6/5.7 | 20 |
Nitrogen-related metabolism | ||||||||
1195 | AAR05449 | Capsicum annuum | alanine aminotransferase | 2.6.1.2 | AAT | 43.3/5.9 | 52.8/5.3 | 10 |
1321 | A9P822 | Populus trichocarpa | S-adenosylmethionine synthetase 1 | 2.5.1.6 | MAT1-a | 40.7/5.3 | 43.2/5.7 | 17 |
1341 | AAT40304 | Medicago sativa | S-adenosylmethionine synthase | 2.5.1.6 | SAMs | 40.6/5.3 | 42.8/5.7 | 28 |
1760 | NP_196765 | Arabidopsis thaliana | carbon-nitrogen hydrolase family protein | 3.5.-.- | CNH | 33.3/6.0 | 40.3/8.8 | 14 |
2607 | P51118 | Vitis vinifera | glutamine synthetase cytosolic isozyme 1 | 6.3.1.2 | GS1 | 36.0/5.5 | 39.2/5.8 | 29 |
Redox-related and other proteins | ||||||||
724 | CAB72130 | Cucumis sativus | heat shock protein 70 | - - - | HSP70-a | 67.1/4.9 | 70.8/5.3 | 30 |
858 | AAU04766 | Cucumis melo | protein disulfide isomerase (PDI)-like protein 2 | 5.3.4.1 | PDI2-a | 58.1/4.8 | 63.7/5.0 | 10 |
1515 | CAN60665 | Vitis vinifera | old yellow enzyme-likee | 1.6.99.1 | OYE | 37.0/6.0 | 42.0/5.8 | 8 |