From: Sequencing of 6.7 Mb of the melon genome using a BAC pooling strategy
 |  |  | Scaffold | |||||
---|---|---|---|---|---|---|---|---|
Linkage group | Marker namea | BAC name | Name | GenBank ID | Length (bp) | Stretches of Ns | BAC-ends Foundb | |
 |  |  |  |  |  | No. | Length (bp) |  |
I | MC216 | Cm57_M112 | Contig311 | HM854822 | 626 | 0 | 0 | 0 |
I | MC279 | Cm31_J021 | Scaffold00087 | HM854819 | 126,619 | 3 | 1,334 | 2 |
I | EST1.16 | Cm33_F232 | Scaffold00078 | HM854813 | 113,787 | 11 | 9,016 | 2 |
I | EST5.27 | Cm43_O211 | Scaffold00052a | HM854797 | 131,697 | 10 | 3,452 | 2 |
II | MC313 | Cm05_B012 | Scaffold0006 | HM854766 | 126,054 | 4 | 4,978 | 2 |
II | 52B5SP6 | Cm52_B051 | Scaffold52B05 | HM854760 | 138,922 | 38 | 29,090 | 2 |
II | MC252 | Cm46_G131 | Scaffold0009 | HM854768 | 151,031 | 2 | 529 | 2 |
III | MC127 | Cm05_P102 | Scaffold05P10 | HM854751 | 114,263 | 7 | 5,100 | 1 |
III | MC148 | Cm45_K102 | Scaffold00035 | HM854788 | 105,652 | 2 | 630 | 2 |
III | CmEXP2 | Cm24_H211 | Scaffold00033 | HM854763 | 86,310 | 3 | 1,125 | 2 |
III | MC054 | Cm52_C091 | Scaffold00024b | HM854780 | 61,053 | 2 | 666 | 1 |
III | MC032 | Cm55_F191 | Scaffold55F19 | HM854755 | 110,853 | 11 | 9,792 | 2 |
IV | MC344 | Cm33_M052 | Scaffold00077 | HM854812 | 148,622 | 6 | 2,636 | 2 |
IV | CmelF4A-2 | Cm59_B111 | Scaffold59B11 | HM854756 | 100,000 | 5 | 5,558 | 2 |
IV | MC275 | Cm11_I121 | Scaffold11I12 | HM854757 | 110,000 | 9 | 6,210 | 2 |
IV | MC239 | Cm06_A031 | Scaffold00012a | HM854770 | 75,205 | 0 | 0 | 1 |
IV | MC060 | Cm46_O062 | Scaffold000413 | HM854791 | 103,741 | 2 | 668 | 2 |
IV | CmEthInd | Cm14_C181 | Scaffold0001 | HM854762 | 108,322 | 1 | 478 | 2 |
V | MC007 | Cm52_M232 | Scaffold00070 | HM854810 | 112,968 | 2 | 567 | 2 |
V | MC233 | Cm24_G051 | Scaffold00017 | HM854775 | 82,645 | 1 | 247 | 2 |
 |  |  | Contig00219 | HM854821 | 810 | 0 | 0 | 0 |
V | EST2.22 | Cm46_I241 | Scaffold00044 | HM854793 | 12,974 | 4 | 4,832 | 1 |
 |  |  | Scaffold00071 | HM854811 | 20,426 | 7 | 9,835 | 1 |
V | MRGH63 | Contig MRGH63: | ScaffoldMRGH63 | HM854749 | 302,015 | 9 | 4,457 | Â |
 |  | Cm13_J041,4 |  |  |  |  |  | 2 |
 |  | Cm14_M221 |  |  |  |  |  | 2 |
 |  | Cm43_H201,2 |  |  |  |  |  | 2 |
V | MC276 | Cm01_N31 | Scaffold00015 | HM854773 | 180,444 | 5 | 2,607 | 1 |
VI | MC268 | Cm02_C042 | Scaffold00031 | HM854785 | 105,693 | 4 | 1,877 | 2 |
VI | MC008 | Cm31_G082 | Scaffold00033 | HM854786 | 109,145 | 3 | 764 | 2 |
VI | MC251 | Cm02_K141 | Scaffold00058 | HM854801 | 121,212 | 8 | 2,788 | 2 |
VI | CI_56-B01 | Cm27_F031 | Scaffold27F03 | HM854758 | 96,265 | 1 | 506 | 2 |
VI | MC042 | Cm20_H141 | Scaffold00018 | HM854776 | 96,294 | 3 | 891 | 2 |
VII | MC373 | Cm55_C151 | Scaffold00057 | HM854800 | 98,578 | 1 | 316 | 2 |
VII | F271 | Cm45_K011 | Scaffold45K01 | HM854759 | 100,000 | 11 | 7,803 | 2 |
VII | F149 | Cm47_C022 | - | - | - | - | - | - |
VII | EST5.15 | Cm47_A051 | Scaffold0004 | HM854764 | 101,589 | 3 | 1,515 | 2 |
VIII | F080 | Cm22_K191 | Scaffold00081 | HM854815 | 99,638 | 6 | 2,137 | 2 |
VIII | Cfd9 | Cm06_D161 | Scaffold00025 | HM854781 | 102,876 | 13 | 10,731 | 1 |
VIII | MC208 | Cm19_K172 | Scaffold00023 | HM854779 | 125,428 | 1 | 242 | 2 |
IX | MC092 | Cm24_H032 | Scaffold24H03 | HM854823 | 106,131 | 3 | 1,282 | 2 |
IX | F036 | Cm34_G201 | Scaffold00069 | HM854809 | 125,129 | 2 | 1,825 | 2 |
IX | MC203 | Cm54_J042 | Scaffold54J04 | HM854753 | 100,000 | 6 | 13,775 | 2 |
IX | CmERF1 | Cm54_I131 | Scaffold54I13 | HM854824 | 94,153 | 3 | 1,036 | 2 |
IX | EST1.17 | Cm10_D041 | Scaffold10D04 | HM854761 | 154,039 | 45 | 28,530 | 2 |
X | EST1.10 | Cm03_A211 | Scaffold00079 | HM854814 | 126,557 | 2 | 482 | 2 |
X | CmXTH5 | Cm41_H091 | Scaffold0005 | HM854765 | 136,275 | 2 | 696 | 2 |
X | EST5.29 | Cm19_G012 | Scaffold00013 | HM854771 | 100,283 | 14 | 8,175 | 2 |
X | CmEXP3 | Cm54_E012 | Scaffold54E01 | HM854754 | 100,000 | 18 | 13,832 | 2 |
XI | MC337 | Cm12_F092 | Scaffold00028 | HM854783 | 118,830 | 3 | 1,840 | 2 |
XI | MC375 | Cm03_C121 | Scaffold00014 | HM854772 | 128,906 | 13 | 9,538 | 1 |
XI | EST6.79 | Cm59_N091 | Scaffold00085 | HM854817 | 102,799 | 1 | 338 | 1 |
XI | A_08-D10 | Cm24_I032 | Scaffold24I03 | HM854752 | 121,276 | 16 | 8,734 | 1 |
XI | EST2.75 | Cm33_O171 | Scaffold00051 | HM854796 | 123,309 | 3 | 1,296 | 2 |
XII | MC123 | Cm59_C102 | Scaffold59C10 | HM854750 | 10,343 | 3 | 1,861 | 0 |
XII | MC132 | Cm03_I021 | Scaffold00086 | HM854818 | 79,495 | 4 | 3,249 | 1 |
XII | MC330 | Cm09_A171 | Scaffold00034 | HM854787 | 96,336 | 1 | 271 | 2 |
XII | MC286 | Cm05_O102 | Scaffold00020 | HM854778 | 142,670 | 8 | 2,708 | 2 |
- | - | Cm21_I082 | Scaffold00061 | HM854803 | 146,020 | 12 | 5,169 | 2 |
- | - | Cm12_I232 | Scaffold00010 | HM854769 | 114,336 | 9 | 8,517 | 2 |